RMSD LABEL=rmsd REFERENCE=reference.pdb TYPE=SIMPLE NOPBC

ABMD ARG=rmsd KAPPA=20 TO=10.0 SEED=12 NOISE=0.2 LABEL=abmd

PRINT ...
  STRIDE=1
  ARG=rmsd,abmd.bias,abmd.rmsd_min 
  FILE=COLVAR FMT=%6.3f
... PRINT

FLUSH STRIDE=100

ENDPLUMED

